Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLQLKKWKCRENDIEAVHNNKGYAYQRKLDALEEVRKGYYPIKRAIDLVLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFSSEVIGFEQRCLVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEGSR |
2OEM Chain:A ((86-100)) | ------------------------------------------------------------------------------------------------------------------------------------ADLPALLVTTFGKLSLD--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162 for 56 contacts (-2.9/contact) +
2D Compatibility (PS) -1533 + (NN) -103 + (LL) 16180
1D Compatibility (HY) -800 + (ID) 250
Total energy: 13332.0 ( 238.07 by residue)
QMean score : 0.137
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