Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METIKQEVRESIVKGIIAGYKDYVNERNEVKKRMVISDAYAFTKSNHIESQVAKHLENFVKYIKENAGPSWKYLKFIFNKD---EEKNNIMFILKNEDYFDEKNVSVGKSLVADKNPKSKNYLEVLMAKNRDINFGTVGEDFEIGHQMTADSILFNIKEGSNRDINSYFLIITYRIDKESKQLAAIKQWLPNPETNSAIMVDDLTELIEKVIVEREDYHIDEEELEVLKNDGELELIDVEHAFGISIDEGNDMIESER |
4K39 Chain:A ((166-214)) | -----------------------------------------------VTSNTARHVNKVYKYFKEK---DFKFLQFINCLDPLYEEKGKYNYSLKPKDY--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4751 for 233 contacts (-20.4/contact) +
2D Compatibility (PS) -4841 + (NN) -1338 + (LL) 14580
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -1700.0 ( -7.30 by residue)
QMean score : 0.247
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