Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEIVKSPRILDEVSKDLNDKYSPSKLSSMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKADGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN |
| 2VED Chain:B ((16-41)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DKRIKDEEDVEKELGLPVLGSIQKFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VED.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1298 for 101 contacts (-12.9/contact) +
2D Compatibility (PS) -2739 + (NN) -650 + (LL) 16584
1D Compatibility (HY) -3200 + (ID) 1300
Total energy: 7397.0 ( 73.24 by residue)
QMean score : 0.686
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