Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKIDTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEKRTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTSEGVHH |
3FK4 Chain:A ((87-109)) | ----------------------------------------------------------------------------------------PDLPAILTTTFGKLSLD-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1066 for 65 contacts (16.4/contact) +
2D Compatibility (PS) -1697 + (NN) -629 + (LL) 12280
1D Compatibility (HY) -800 + (ID) 250
Total energy: 9970.0 ( 153.38 by residue)
QMean score : 0.141
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