Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFSQNLFRCPTPTCIVCRNWESNFSLLGPTPQLALPVEFLFEILCVGAPD
1Z6M Chain:A ((36-49))
-----------NVRCPYCRKWFEES--------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Z6M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3068 for 51 contacts (-60.2/contact) +
2D Compatibility (PS) -1509 + (NN) -1238 + (LL) 2504
1D Compatibility (HY) -800 + (ID) 200
Total energy: -4311.0 ( -84.53 by residue)
QMean score : -0.121
(partial model without unconserved sides chains):
PDB file :
Tito_1Z6M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z6M-query.scw
PDB file :
Tito_Scwrl_1Z6M.pdb
: