Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKEQQLAERIIAAVGGMDNIDSVMNCMTRVRIKVLDENKVDDQELRHIDGVMGVIHDERIQVVVGPGTVNKVANHMAELSGVKLGDPIPHHHNDSEKMDYKSYAADKAKANKEAHKAKQKNGKLNKVLKSIANIFIPLIPAFIGAGLIGGIAAVLSNLMVAGYISGAWITQLITVFNVIKDGMLAYLAIFTGINAAKEFGATPGLGGVIGGTTLLTGIAGKNILMNVFTGEPLQPGQGGIIGVIFAVWILSIVEKRL--HKIVPNAIDIIVTPTIALLIVGLLTIFIFMPLAGFV---SDSLVSVVNGIISIGGVFSGFIIGASFLPLVMLGLHHIFTPIHIEMINQSGATYLLPIAAMAGAGQVGAALALWVRCKRNTTLRNTLKGALPVGFLGIGEPLIYGVTLPLGRPFLTACIGGGIGGAVIGGIGHIGAKAIGPSGVSLLPLISDNMYLGYIAGLLAAYAGGFVCTYLFGTTKAMRQTDLLGD |
| 1FFT Chain:A ((287-438)) | --------------------------------------------------------------------------------------------------------------------------------------VYILILPVF---GVFSEIAATFSRKRLFGYTSLVWATVCITVLSFI-----VWLHHFFTM------GAGANVNAFFGITTMIIAIP---------------------TGVKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFSVG----GMTGVLLAVPGADFVLHNSLFLIAHFHNVI-IGGVVFGCFAGMTY------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FFT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137541 for 1046 contacts (-131.5/contact) +
2D Compatibility (PS) -13662 + (NN) 12584 + (LL) 20412
1D Compatibility (HY) -18400 + (ID) 2400
Total energy: -139007.0 ( -132.89 by residue)
QMean score : 0.156
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