Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLSKLPLFNHFANIRIQPKLIIKLFLTLIIIVTYTFVSGLSVDYKKLLSEAGLSETSLAQIKIFSQISIFFSRVFSVLFTFLIILVISRIMRSDANTKSIFSATLSYILFTNAISLIILTIQISAGLSLIDYSITSLNIFAKGNRILGTFDLQFFVQAYILTVMLIGTSKLSIRASTIWGIIYLILIITFSLISISIQ |
| 1V54 Chain:G ((9-34)) | ---------------------------------------------------------------------------------------------GGTGARTWRFLTFGLALPSVALCTLN-------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1V54.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -3993 for 103 contacts (-38.8/contact) +
2D Compatibility (PS) -2598 + (NN) 732 + (LL) 17428
1D Compatibility (HY) -400 + (ID) 150
Total energy: 11019.0 ( 106.98 by residue)
QMean score : 0.113
|
|
|