Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRRKRKWLIVICVLLVLITISQILKHFNYGTESKEAYNTYTVEK---ERQLDLQGKAYPREVKTYYKNNQVGTYLGVQVADGQTVKKGDMLINYKINSNKRQ--QLVDKINDTQHI-------ITEVYLNITKGLNNR-----------EIQKKLIEYK-------QTLYEAQQQLYQYDSQ-NRDSMYASFDGKIMIKNIDN---DSDNQ---PILYLISK-ESHIKTSVTEFDLNKVKKGDKVNLSITST-GKTGAGIIKQISELPISYEENLSLHENDALHLPESNNDGELANSKSISASPIFKSNNNSELSKYGVIID--DLSLPIRAGYSLEIKVPLNA----IKIPKSVLTKGNNVFIVNKNSIVEKRNIRIKRINGDIIVEKGLKPGDKLIKQPKSTMNDGDKVEISS |
| 3FPP Chain:A ((43-308)) | -------------------------------------------PGDLQQSVLATGKLDALRKVDVG-AQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPEKVND----------------------------------------AIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLT----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41275 for 1385 contacts (-29.8/contact) +
2D Compatibility (PS) -22815 + (NN) 3444 + (LL) 8888
1D Compatibility (HY) -2400 + (ID) 1650
Total energy: -55808.0 ( -40.29 by residue)
QMean score : 0.304
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