Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAMIKMSPEEIRAKSQSY----GQGSDQIRQILSDLTRAQGEIAANWEGQAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQEQDQQLSNNFGLQ
4J41 Chain:A ((4-89))
MAEIKITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQ----WAGATQAKFRGEFIQSKQAMQQYIAILEGISTDLKRIADKFRNT-----------
General information:
TITO was launched using:
RESULT:
Template:
4J41.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2795 for 434 contacts (-6.4/contact) +
2D Compatibility (PS) -8631 + (NN) -673 + (LL) 820
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: -18029.0 ( -41.54 by residue)
QMean score : 0.720
(partial model without unconserved sides chains):
PDB file :
Tito_4J41.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J41-query.scw
PDB file :
Tito_Scwrl_4J41.pdb
: