Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTANVMHPNQY---RIRYSSQKQDLNEDMTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFKRMIDAQDAMDQHDAWDYNAEIKTILSKLGIHDTT-KYIKELSGGQQKRVVLAKTLIEQPDLLLLDEPTNHLDFE---SISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGNYESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQQYKDDKGELNLAYSRLGKQV--FELEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKTTLLNILSGEDQQFEGKLKTGQTV--KVAYFKQTDE-TLDRDIRMIDYLREESEVAKEKDGTSVSITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTILEDYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKSTLKQQSKSYTTVRKKNGLSYKEKLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELNEEKEQLEIQYDLDITRWSELEEIKEQQ |
| 1YQT Chain:A ((44-435)) | -------------------------VKEGMVVGIVGPNGTGKSTAVKILAG---QLIPNLCGDNDSWDGVIRAFRG----NELQNYFEKLKNGEIRPV-VKPQYVDLIPKAVKGKVIELLKKA-------------DETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSD-IIHVVYGE----PGVYGIFSQPKGTR----NGINEFLRGYLKDENVRFRP-YEIKFTKTGERV----EIERETL-----------VTYPRLVKDYGSFRLEVEPGEI-------------KKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKIEWDLTVAYKPQYIKADYEGTVYELLSKIDASKLNSNFYKTELLKPLGIIDLYDR----------EVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVE------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33426 for 2818 contacts (-11.9/contact) +
2D Compatibility (PS) -40150 + (NN) -12959 + (LL) 18728
1D Compatibility (HY) -24000 + (ID) 6100
Total energy: -97907.0 ( -34.74 by residue)
QMean score : 0.301
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