Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIIYFSFTG-NVRRFIKRTELENTLEITAENCMEPVHEPFIIVTGTIG----FGEVPEPVQSFL--EVNHQYIRGVAASGNRNWGLNFAKAGRTISEEYNVPLLMKFELHGKNKDVIEFKNKVGNFNENHGREKVQSY
3N3A Chain:C ((23-148))
-QLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEF------------
General information:
TITO was launched using:
RESULT:
Template:
3N3A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62157 for 906 contacts (-68.6/contact) +
2D Compatibility (PS) -12693 + (NN) -1355 + (LL) 668
1D Compatibility (HY) -9600 + (ID) 2300
Total energy: -87437.0 ( -96.51 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_3N3A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N3A-query.scw
PDB file :
Tito_Scwrl_3N3A.pdb
: