Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINKDIYQALQQLIPNEKIKVDEPLKRYTYTKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIRGIVISLLSLDHIDVSDDA----IIAGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYALCVN-EQGSLIKLTTKELELDYRNSIIQKEH-----LVVL------EAAFTLAPGKMTEI-------QAKMDDLTERRESK--QPLEYPSCGSVFQRP-----------------PGH---------FAGKLIQDSNLQGHRIGGVEVSTKHAGFMVNVDNGTATDYENLIHYVQKTVKEKFGIELNREVRIIGEHPKES |
| 2MBR Chain:A ((3-328)) | ------------------------LKPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-YRGTVI-INRIKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTAKECRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQPVLTYGDLTRLDPTTVTPQQVFNAVCHMRTTKLPDPKVNGNAGSFFKNPVVSAETAKALLSQFPTAPNYPQADGSVKLAAGWLIDQCQLKGMQIGGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFIG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2MBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175476 for 2242 contacts (-78.3/contact) +
2D Compatibility (PS) -28813 + (NN) -2221 + (LL) 1920
1D Compatibility (HY) -17200 + (ID) 4450
Total energy: -226240.0 ( -100.91 by residue)
QMean score : 0.602
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