Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEIKTLTNNDFNEYKRLVSTVNEEFTQDSHYSQTMTDTLIHDILNQGSP--KCIVFGC-YENETLIATAALEQIRYVGKEHKSLIKYNFVTNND--KSINSELINFIINYARQ-NNYESLLTSIVSNNIGAKVFYSALGFDILGFEKNAIKIGNTYFDEHWLFYDLINK
3TTH Chain:A ((7-168))
-IRLSALEREDLKFVHELNNN----IMSYWFEEPYESYRELEDLHIKHIHDQSERRFIIKDLKDNKVGLVELTEIDF--IHRRCEFA-IIISPGEEGKGYATEATDLTVEYAFSILNLHKIYLLVDEDNPAALHIYRKSGFAEEGKLVDEYYSKGRYRTAIRMYVLKK--
General information:
TITO was launched using:
RESULT:
Template:
3TTH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75166 for 1050 contacts (-71.6/contact) +
2D Compatibility (PS) -16314 + (NN) -672 + (LL) 624
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -95728.0 ( -91.17 by residue)
QMean score : 0.318
(partial model without unconserved sides chains):
PDB file :
Tito_3TTH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TTH-query.scw
PDB file :
Tito_Scwrl_3TTH.pdb
: