Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKFYQYKNCTTCKKAAKFLDEYGVSYEPIDIVQHTPTINEFKTIIANTGV-EINKLFNTHGAKYRELDLKNKLQTLSDDEKLELLSSDGMLVKRPLAVMGDKITLGFKEDQYKETWLA
3F0I Chain:A ((6-117))
-VVIYHNPKCSKSRETLALLENQGIAPQVIKYLETSPSVEELKRLYQQLGLNEVRAMMRCKEELYKELNLGDS--QLSDDALFAAMAEHPKLIERPIVVCNGQARHGRPPEQVLE----
General information:
TITO was launched using:
RESULT:
Template:
3F0I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47554 for 826 contacts (-57.6/contact) +
2D Compatibility (PS) -11871 + (NN) -2681 + (LL) 1032
1D Compatibility (HY) -8400 + (ID) 1250
Total energy: -70724.0 ( -85.62 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_3F0I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0I-query.scw
PDB file :
Tito_Scwrl_3F0I.pdb
: