Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYFVLAIFTIISASVSLGYSIQACASSHNINAYYALSRSLPLFLLAIFSLVIHSAIFLITISIAMILVQFLDAIVGYKSEDVFKTYGPLATSVVNLILLIVFLF
1I39 Chain:A ((1-22))
------------------------------------------------------------------------MKAGIDEAGKGCVIGPLVVAGV----------
General information:
TITO was launched using:
RESULT:
Template:
1I39.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3099 for 82 contacts (37.8/contact) +
2D Compatibility (PS) -2160 + (NN) 1369 + (LL) 9244
1D Compatibility (HY) 400 + (ID) 250
Total energy: 11702.0 ( 142.71 by residue)
QMean score : -0.292
(partial model without unconserved sides chains):
PDB file :
Tito_1I39.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I39-query.scw
PDB file :
Tito_Scwrl_1I39.pdb
: