Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNNVLLEVKDLETSLKINNEWLATVENISFELSKGEVLGIVGESGCGKSILSKSIIKLLPEKISKLSSGEVIFDGKRIDTLNEKQLLDIRGNDIAMIFQEPMTALNPVFT-IKNQLVESIKSHKKISKKEANNLAKDLLKKVGIARQDEILNSYPHQLSGGMRQRVMIAMAISCSPKLLIADEPTTALDVTIQAQILDLLKELQKETQMAIMMITHDLSVVAEFCDKVLVMYAGQIVEFGGIKEILHNPKHPYTQKLLSTIPKLKEGQKRLETIEGIVPSIQAFHVNKCRFANRCNKKLDICNNQSPKMHVCEDVIVRCHLYKNEYKEI
4YMU Chain:J ((14-239))---------------------LEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCI-NLLEEP----TKGEVFIDGVKIN--NGKVNINKVRQKVGMVFQH--FNLFPHLTAIENITLAPVKV-KKMNKKEAEELAVDLLAKVGLLDKKD---QYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLANEG-MTMVVVTHEMGFAREVGDRVIFMDDGVIVEEGTPEEIFYRAKNERTREFLSKI--------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -141056 for 1787 contacts (-78.9/contact) +
2D Compatibility (PS) -24098 + (NN) -9221 + (LL) 7908
1D Compatibility (HY) -20800 + (ID) 4500
Total energy: -191767.0 ( -107.31 by residue)
QMean score : 0.557

(partial model without unconserved sides chains):
PDB file : Tito_4YMU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YMU-query.scw
PDB file : Tito_Scwrl_4YMU.pdb: