Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGEQFTQIKRPVSRLTEKVLGWLCWVMLLVLTVITMFIALVSFSNNTSIANLENTLNNNAFIQQLLAGNGYNTTQFVIWLQNGIWAIIVYFIVCLLISFLALISMNIRILSGFLFLISAIVTIPLVLLIVTLIIPILFFIIAMMLFIRKDKVEMVAPQYYEEYNGPIYDYREPVYERPQPKDDYYDVPKYEKELDKSNTVYDQEQERDKYDQFPKRAVESEYNHDERTEEEPSVLSRQAKYKQKSTEELGIEDDGYYAEPEVDPKELKAQQKREKAEIKAKKKEKRKAYNQRMKERRKNQPS-AVSQRRMNFEER-----RQIYNNDISEERNSSEVKDKKEQE |
| 2HO1 Chain:A ((80-199)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VFQTE-EPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLY------PERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYD------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HO1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 113382 for 810 contacts (140.0/contact) +
2D Compatibility (PS) -12199 + (NN) -4241 + (LL) 19552
1D Compatibility (HY) 800 + (ID) 900
Total energy: 116394.0 ( 143.70 by residue)
QMean score : 0.019
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