Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMKRFLTIVQILLVVIIIIFGYKIVQTYIEDKQERANYEKLQQKFQMLMSKHQEHVRP-QFESLEKINKDIVGWIKLSGTSLNYPVLQGKTNHDYLNLDFEREHRRKGSIFMDFRNELKNLNHNTILYGHHVGDNTMFDVLEDYLKQSFYEKHKIIEFDNKYGKYQLQVFSAYKTTTKD-NYIRTDFENDQDYQQFLDETKRKSVINSDVNVTVKDKIMTLSTCEDAYSETTKRIVVVAKIIKVS |
| 4Y4Q Chain:A ((59-239)) | -----------------------------------------------------------SGFSKLQELNPEVLGWINVYGTNIDYPLVQAKDNE----------FAATGAIFLDARNNPKFEDFNTIIYGHHVENGVMFGDVAKFADQEFFDQHRYGSIYYNGVEKGLEIFEMLEVDAYDFNIYDPGIQGEDRQQAYLDHLLSVAMHKRDISLSPSDRIILLSTC--FLDVTNGRHIVVAKI---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Y4Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54211 for 1278 contacts (-42.4/contact) +
2D Compatibility (PS) -17954 + (NN) -4275 + (LL) 7968
1D Compatibility (HY) -14400 + (ID) 2700
Total energy: -85572.0 ( -66.96 by residue)
QMean score : 0.593
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