Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNKLIAKSLLTIAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVR
2WY7 Chain:Q ((23-71))
------------------------------------------------------------------------------------------------------------ERVKSANDAISKLNEKDSIENRRLAQREVNKAPMD---VKEHLQKQLDALVA-----
General information:
TITO was launched using:
RESULT:
Template:
2WY7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4476 for 306 contacts (-14.6/contact) +
2D Compatibility (PS) -5313 + (NN) -2465 + (LL) 6544
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -7810.0 ( -25.52 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_2WY7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WY7-query.scw
PDB file :
Tito_Scwrl_2WY7.pdb
: