Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPSNGVDIIDAKGHFVSPGFVDVHVHLREP--GGEYKETIETGTKAAARGGFTTVCPMPNTRPVPDSVEHF-EALQKLIDDNAQVRV-LPYASITTRQLGKELVDFPALVKEGAFAFTD----DGVGVQTASMMYEGMIEAAKVNKAIVAHCEDNSLI---YGGAMHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHVSTKESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYK----MNPPLRSTEDREALLEGLLDGTIDCIATDHAPHARDEKAQPM---EKAPFGIVGSETAFPLLYTHFVKNGDWTLQQLVDYLTIKPCETFNL--EYGTLKENGYADLTIIDLDSEQEIKGEDFLSKADNTPFIGYKVYGNPILTMVEGEVKFEGDK |
| 4TQT Chain:A ((16-448)) | -KVIKGGTVITADRTFRADILIEDGKIAAIGDSLE---GDEVIDASGCYVMPGGIDPHTHLQMPFMGTYSSDDFDTGTAAALAGGTTMVVDFV----LPDSEGNLLDALQEWFQKAGKARTDYSFHMAITGWNERTFNEMAEVVKRGINTF-HFMAYKGALMVNDDEMFASFQRCAELGAMPLVHAENGDIVAQLQAKLMAEGNDGPEAHAYSRPPEVEGEATNRAIMIADQAGVPLYVVHVSCEQSHEAIRRARQKGMRVFGEPLIQHLTLDESEYHNRDWDYAARRVMSPPFRDKLNQDSLWAGLAAGSLQCVATDHCAFTTEQKRYGIGNFTKIPNGTGGLEERMPVLWTRGVRTGRLTPNEFVAVTSTNIAKILNIYPQKGAVVPGADADLVIWDPETTKKISAKTQHSSIDYNVFEGFELKGLPIMTLSRGRIAFD--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136614 for 3702 contacts (-36.9/contact) +
2D Compatibility (PS) -44476 + (NN) -13972 + (LL) -240
1D Compatibility (HY) -16400 + (ID) 6150
Total energy: -217852.0 ( -58.85 by residue)
QMean score : 0.473
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