Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYNKDDVLKQADNIANKIKNLDTIKTYQQIEAQIHQNQTIKTKMDMLKKHQKQAVNFQNYGKQNALEQSEHTIQSIEAEINTLPIVEQFQTSQYEANQLLKMFVSTMETRLNDHNKAKHSD
3ZNI Chain:A ((66-105))
-------------------------------AQLSENEYFKIYIDSLMKKSKRAIRLFKEGKERMYEEQSQ--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZNI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7693 for 159 contacts (48.4/contact) +
2D Compatibility (PS) -4187 + (NN) -1327 + (LL) 6448
1D Compatibility (HY) -2000 + (ID) 600
Total energy: 6027.0 ( 37.91 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_3ZNI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZNI-query.scw
PDB file :
Tito_Scwrl_3ZNI.pdb
: