Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALSTFKREHIKKNLRNDEYDLVIIGGGITGAGIALDASERGMKVALVEMQDF-AQGTSSRSTKLVHGGLRYLKQFQIGVVAETGKERAIVYENGPHVTTPEWMLL---------------PMHKGGT----FGKFSTSIGLGMYDR-LAGVKKSERKKMLSKKETLAKEPLVKKE---GLKGGGYYVEYRTDDARLTIEVMKRAAEKG-AEIINYTKSEHFTYDKNQQVNGVKVIDKLTNENYTIKAKKVVNAAGPWVDDV----RSGDYARNNKKLRLTKGVHVVI-DQSKFPLGQAVYFDTEKDGRMIFAIPR-EGKAYVGTTDTFYDNIKSSPLTTQEDRDYLIDAINYMFPSVNVTDEDIESTWAGIRPLIYEEGKDPSEISRKDEIWEGKSGLLTIAGGKLTGYRHMAQDIVDLVSKRLKKDYGLTFSPCNTKGLAISGGDVGGSKNFDAFVEQKVDVAKGFGIDEDVARRLASKYGSNVDELFNIAQTSQYHDSKLPLEIYVELVYSIQQEMVYKPNDFLVRRSGKMYFNIKDVLDYKDAVIDIMADMLDYSPAQIEAYTEEVEQAIKEAQHGNNQPAVKE |
| 4X9M Chain:A ((39-356)) | --------------------DVLIVGGGVIGCATAYELSQYKLKVTLVEKHHYLAQETSHANSGVIHTGI----------------------DPNPHKLTAKYNILGKKLWLNTYFKRLGFPRQKIRTLIVAFNEMEREQLEVLKQRGIANQINLEDIQMLSKEETLKLEPYVNPEIVAGLKIEGSW----AIDPVLASKCLALAAQQNKVQICTNTEVTNIS----KQVDGTYLVWTNNETTPSFKVKKIIDAAGHYADYLAHLAKADDFEQTTR-----RGQYVVVTNQGELHLNSMVFMVPTIHGKGVIVSPMLDGNFLVGPTALDGVDKEATRYITKDAPCMLTKIGKHMVPSLNINNALI--SFAGSRPI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15077 for 2195 contacts (-6.9/contact) +
2D Compatibility (PS) -30408 + (NN) -1819 + (LL) 18244
1D Compatibility (HY) -15600 + (ID) 4250
Total energy: -48910.0 ( -22.28 by residue)
QMean score : 0.376
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