Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIFDYEDIQLIPNKCIVESRSECDTTIQFGPKKFK-----LPVVPANMQTVMNEKLAKWFAENDYFYIMHR-FDEEARIPFIKHMQNSGLFASISVGVKKAEFDFIEKLAQEKLIPEYITIDIAHGHSDSVINMIKHIKNHIPDSFVIAGNVGTPEGVRELENAGADATKVGIGPGRVCITKIKTGFGTGGWQLAALNICSKAA---RKPLIADGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKEYFGSASEFQK----GEHKNVEGKKMFVEHKGSLMDTLKEMQQDLQSSISYAGGKDLKSL-RTVDYVIVRNSIFNGDRD |
| 2BZN Chain:A ((20-346)) | ---LDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYSLVQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGY--PQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYA-----SEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRV---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BZN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143030 for 2727 contacts (-52.4/contact) +
2D Compatibility (PS) -33080 + (NN) -7858 + (LL) 116
1D Compatibility (HY) -17600 + (ID) 5500
Total energy: -206952.0 ( -75.89 by residue)
QMean score : 0.471
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