Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYNYHLLEDRDVLCIDQKSFFASVSCIEKGLDPL--ETKLAVVADTKRQGSVILAATPKLKELGIK----TGSRLFEIPHRNDIYIINPSMRKYLNVSVAISKIALRYIPPEDLHQYSIDEFFMDVTDSYHRFSSTVHAFCERLKREIYEETGIYCTVGIGSNMLLSKIAMDVEAKHSQNGIAEWRYQDVPTKLWPIQPLRDFWGINRRTEAKLNKRGIFTIGDLAKYPYKFLKKEFGILGVDMHLHANGIDQSKVREKHKISNPSICKSQILMRD-YHFDEAKVVMQELIEDVASRVRARKKVARTIHFAFGYSDEGGVHKQYTLKDPTNLEKDIYKVVMHFADKLCNKQALYRTLSISLSQFINEDERQLSLFEDEYQRKRDECLAKTIDQLHLKYGKGIVSKAVSFTEAGTKHGRLGLMAGHKM |
| 4Q45 Chain:F ((3-275)) | ---------RKIIHVDMDCFFAAV---EMRDNPALRDIPIAIGGSRERRGVISTANYPA-RKFGVRSAMPTGMALALCPH---LTLLPGRFDAYKEASNHIREIFSRYT--SRIEPLSLDEAYLDVTDSVHCHGSAT-LIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITP---AEVPAFLQTL-PLAKIPGVGKVSAAKLEAMGLRTCGDVQACDLVMLLKRFGKFGRILWERSQGIDERDVNSER--LRKSVGVERTMAEDIHHWSECEAIIERLYPELERRL--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q45.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108001 for 1994 contacts (-54.2/contact) +
2D Compatibility (PS) -28583 + (NN) -10543 + (LL) 10836
1D Compatibility (HY) -13600 + (ID) 3650
Total energy: -153541.0 ( -77.00 by residue)
QMean score : 0.398
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