Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQGTVKWFNAEKGFGFIEVEGENDVFVHFSAINQDGYKSLEEGQAVEFEVVEGDRGPQAANVVKL
1HZ9 Chain:A ((1-66))
MQRGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQAVSFEIVQGNRGPQAANVVKL
General information:
TITO was launched using:
RESULT:
Template:
1HZ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30944 for 435 contacts (-71.1/contact) +
2D Compatibility (PS) -6627 + (NN) 2847 + (LL) 0
1D Compatibility (HY) -8800 + (ID) 2450
Total energy: -45974.0 ( -105.69 by residue)
QMean score : 0.639
(partial model without unconserved sides chains):
PDB file :
Tito_1HZ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HZ9-query.scw
PDB file :
Tito_Scwrl_1HZ9.pdb
: