Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHF-----EEDIAKDYLYVLE-ENDKIYGFIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSKEYKGAATELFNYVIDVVKARGAE----VILTDTFALNKPAQGLFAKFGFHKVGEQLMEYPPYDKGEPFYAYYKNLKE
2OH1 Chain:A ((15-178))
LVRFAAPTDRLKINDLMIDTARWLKESGSTQWSD---ILHGFDVHNIEQRIELGEVALFETEAGALAGAMIIRKTPSDWDTDLWEDLAIDKAYYLHRIMVSRAFSGIS--LSKQMIYFAEKLGIEMSVPFIRLDCIESNETLNQMYVRYGFQFSG----------KKNGFYLYQKELSQ
General information:
TITO was launched using:
RESULT:
Template:
2OH1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76815 for 1071 contacts (-71.7/contact) +
2D Compatibility (PS) -16795 + (NN) -9284 + (LL) 768
1D Compatibility (HY) -10800 + (ID) 1950
Total energy: -114876.0 ( -107.26 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_2OH1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OH1-query.scw
PDB file :
Tito_Scwrl_2OH1.pdb
: