Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWLVIMIIHNKARFLC--CSKLLEKFYSFLVTRIKKRGIFFIK
1PZW Chain:A ((48-68))
-----------SKVICNVCWTQVSEFHQFYVS-----------
General information:
TITO was launched using:
RESULT:
Template:
1PZW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5277 for 69 contacts (-76.5/contact) +
2D Compatibility (PS) -1804 + (NN) -173 + (LL) 2676
1D Compatibility (HY) -2800 + (ID) 250
Total energy: -7628.0 ( -110.55 by residue)
QMean score : 0.222
(partial model without unconserved sides chains):
PDB file :
Tito_1PZW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PZW-query.scw
PDB file :
Tito_Scwrl_1PZW.pdb
: