Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNECAFGTKDPVYLNYHDHVWGQPLYDSKALFKLLALESQHAGLSWLTILKKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQAQGYLKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDDTATQLSKDLKQYGFKFLGPVTVFSFLEAAGLYDAHLKDCPSKPKHN
4AIA Chain:E ((3-188))
MNECAFGTKDPVYLNYHDHVWGQPLYDSKALFKLLALESQHAGLSWLTILKKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQAQGYLKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDDTATQLSKDLKQYGFKFLGPVTVFSFLEAAGLYDAHLKDCPSKPKHN
General information:
TITO was launched using:
RESULT:
Template:
4AIA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91683 for 1450 contacts (-63.2/contact) +
2D Compatibility (PS) -19972 + (NN) -10812 + (LL) 0
1D Compatibility (HY) -26000 + (ID) 9300
Total energy: -157767.0 ( -108.80 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_4AIA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AIA-query.scw
PDB file :
Tito_Scwrl_4AIA.pdb
: