Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHYHFVGIKGSGMSSLAQIMHDLGHEVQGSDIENY--VFTEVALRNKGIKIL----PFDANNIKEDMV-VIQGNAFASSHEEIVRAHQLKLDVVSYNDFLGQIIDQYTSVAVTGAHGKTSTTGLLSHVMNGDKKTSFLIGDGTGMGLPES---------DYFAFEACEYRRHFLS-YKPDYAIMTNIDFDHPDYFKDINDVFDAFQEMAH----------NVKKGIIAWGDDEHLRKIEADVPIYYYGFKDSDDIYAQNIQITDKGTAFDVYVDGEFYDHFLSPQYGDHTVLNALAVIAISYLEKLDVTNIKEALETFGGVKRRFNETTIANQVIVDDYAHHPREISATIETARKKYPHKEVVAVFQPHTFSRTQAFLNEFAESLSKADRVFLCEIFGSIRENTGALTIQDLIDKIEGASLINEDSINVLEQFDNAVVLFMGAGDIQKLQNAYLDKLGMKNAF |
| 3LK7 Chain:A ((15-314)) | ------LGLARSGEAA-ARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLEL--LDEDFCYMIKNPGIPYNNPMVKKALEKQIPVLTEVE-LAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQRGLLAGN---IGFPASEVVQAANDKDTLVMELSSFQLMGVKEFRPHIAVITNLMPTHLDYHGSFEDYVAAKWNIQNQMSSSDFLVLNFNQGI-----SKELAKTTKATIVPFSTTEKVDGAYVQDKQLFYKGENI------MSVDDIGVP--GSHNVENALATIAVAKLAGISNQVIRETLSNFGGVKHRL------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87609 for 2284 contacts (-38.4/contact) +
2D Compatibility (PS) -28894 + (NN) -10040 + (LL) 11648
1D Compatibility (HY) -16400 + (ID) 3850
Total energy: -135145.0 ( -59.17 by residue)
QMean score : 0.465
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