Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIGDISIHYLNGGNTKMDGGAMFGVVPKPLWSKQYNANERNQINLPTHPILIQTAQYNLIIDAGIG----------NGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKHFEPVPGIKMQHSGGHSFGHTIITIESQGDKAVHMGDIFPTTAHKNPLWVTAYDDYPMQSIREKERMIPYFIQQQYWFLFYHDENYFAVKYSDDGENIDAYILRETLVDNN |
4J5F Chain:A ((35-192)) | -------------------------------------------LNLPVWCYLLETEEGPILVDTGMPESAVNNEGLFNGTFVEGQILP-KMTEEDRIVNILKRVGYEPDDLLYIISSHLHWDHA------GGNGAFTNTPIIVQRTEYEAAL-----HREEYMKECILPHLNYKII-EGDYEVVPGVQLLYTPGHSPGHQSLFIETEQSGSVLL---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57916 for 1085 contacts (-53.4/contact) +
2D Compatibility (PS) -16090 + (NN) -5530 + (LL) 7368
1D Compatibility (HY) -12400 + (ID) 2250
Total energy: -86818.0 ( -80.02 by residue)
QMean score : 0.484
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