Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYKELATFLKVLSDSSRLEILDLLSCGELCACDLLAHFQFSQPTLSYHLKALVKTNLVTTRKIGNKHLYQLNHNIFESVINNLSKVHTSNQRCFCHNLKTGEC
3PQJ Chain:A ((24-103))
----EVANLLKTLSHPVRLMLVCTLVEGEFSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRNIKQIFYRLTEAKAAQLVNAL--------------------
General information:
TITO was launched using:
RESULT:
Template:
3PQJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80559 for 531 contacts (-151.7/contact) +
2D Compatibility (PS) -8739 + (NN) -4099 + (LL) 1340
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: -98157.0 ( -184.85 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_3PQJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PQJ-query.scw
PDB file :
Tito_Scwrl_3PQJ.pdb
: