Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKKKMLAATLSVGLIAPLASPIQESRANTNIENIGDGAEVIKRTEDVSSKKWGVTQNVQFDFVKDKKYNKDALIVKMQGFINSRTSFSDVKGSGYELTKRMIWPFQYNIGLTTKDPNVSLINYLPKNKIETTDVGQTLGYNIGGNFQSAPSIGGNGSFNYSKTISYTQKSYVSEVDKQNSKSVKWGVKANEFVTPDGKKSAHDRYLFV------QSPNGPTGSAREYFAPDNQLPPLVQSGFNPSFITTLSHEKGSSDTSEFEISYGRNLDITYATLFPRTG-----IYAERKHNAFVNRNFVVRYEVNWKTHEIKVKGHN |
| 4J0O Chain:A ((10-291)) | ------------------------------NIENIGDGAEVVKRTEDTSSDKWGVTQNIQFDFVKDKKYNKDALILKMQGFINSKTTYYNYKNTDH--IKAMRWPFQYNIGLKTNDPNVDLINYLPKNKIDSVNVSQTLGYNIGGNFNSG-----NGSFNYSKTISYNQQNYISEVEHQNSKSVQWGIKANSFITSLGKMSGHDPNLFVGYKPYSQNP-------RDYFVPDNELPPLVHSGFNPSFIATVSHEKGSGDTSEFEITYGRNMDVTHATR--RT-AGNSYLEGSRIHNAFVNRNYTVKYEVNWKTHEIKVKGHN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50343 for 2134 contacts (-23.6/contact) +
2D Compatibility (PS) -28618 + (NN) -13435 + (LL) 1972
1D Compatibility (HY) -26800 + (ID) 9950
Total energy: -127174.0 ( -59.59 by residue)
QMean score : 0.457
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