Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKDKDPKLNYHEEENSMVTDFEDLKELGKEMEQISDQNDQEKNSEEDSQ
2DJ6 Chain:A ((42-58))
--------------KNGYVMDFLELRKIVEE-------------------
General information:
TITO was launched using:
RESULT:
Template:
2DJ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2952 for 58 contacts (50.9/contact) +
2D Compatibility (PS) -1911 + (NN) -1325 + (LL) 1420
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -1164.0 ( -20.07 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_2DJ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DJ6-query.scw
PDB file :
Tito_Scwrl_2DJ6.pdb
: