Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRGESVFE----PEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ
1A04 Chain:A ((9-216))
----ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASL------ERDVNQ-LTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF-
General information:
TITO was launched using:
RESULT:
Template:
1A04.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99668 for 1577 contacts (-63.2/contact) +
2D Compatibility (PS) -20793 + (NN) -6034 + (LL) 1312
1D Compatibility (HY) -17200 + (ID) 3400
Total energy: -145783.0 ( -92.44 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_1A04.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A04-query.scw
PDB file :
Tito_Scwrl_1A04.pdb
: