Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDA
3H0R Chain:C ((2-92))
---VDREWVLKIAKLARLELKEEEIEVFQKQLSDILDFIDQLKELDTENVEPYIQEFE-ETPMREDEPHPSLDREKALMNAPERKDGFFVVPRVV-----
General information:
TITO was launched using:
RESULT:
Template:
3H0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5670 for 367 contacts (-15.4/contact) +
2D Compatibility (PS) -9593 + (NN) -3551 + (LL) 696
1D Compatibility (HY) -6800 + (ID) 1950
Total energy: -26868.0 ( -73.21 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_3H0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H0R-query.scw
PDB file :
Tito_Scwrl_3H0R.pdb
: