Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFFFIGLLVFVVFFTAATIIWFSYDKNKYGTKQYDKTFKDDAFDNVSINLDSTELRIKRGNQ--FRVKYDGD----NDILINIVDKTLKISDKRSKTRGYAIDMNPFHENKKTLTIEMPDKMIKRLNLSSGAGSVRIS-DVDLENTSIQ-SINGEVVIKNSNLDALDSKT-NNSSTYISKSNIKNSNIKV-VIGTLQIDKSQIKQSIFLN-DHGDIEFKNMPSKVDAKASTKQGDIRFKYDSKPEDTILKLNPGTGDSVVKNKTFTNGKVGKSDNVLEFYTIDGNIKVE |
| 3PET Chain:A ((11-185)) | ----------------------------------LITRDYKVKEFNKIDAGT-VGNIYYTQSTDGKTDLQIYGPDNIVALIQVAVKDNTLFLSIDKSK---K---VR--NFKKMKITITSPT--LNGISFK-GVGDVHIENGLTTDNLDIESKGVGNVDIQSLTCQKLNVQSMGVGDVKLEGT-AQIAALHSKGVGNIEAGNLRANAVEASSQGVGDITCNA--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27743 for 1299 contacts (-21.4/contact) +
2D Compatibility (PS) -17339 + (NN) -1929 + (LL) 6176
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -47835.0 ( -36.82 by residue)
QMean score : 0.354
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