Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQDIISTIGDLVKWIIDTVNKFTKK
2AJJ Chain:A ((5-22))
--------VLDLIYSLHKQINRGLKK
General information:
TITO was launched using:
RESULT:
Template:
2AJJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1515 for 68 contacts (-22.3/contact) +
2D Compatibility (PS) -1793 + (NN) 152 + (LL) 828
1D Compatibility (HY) -800 + (ID) 250
Total energy: -3378.0 ( -49.68 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_2AJJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AJJ-query.scw
PDB file :
Tito_Scwrl_2AJJ.pdb
: