Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLESKWGLRFIAFLLALFFFLSVNNVFGNIFNTGNLGQKSSKTIQDVPVEILYNTKDLHLTKAPETVNVTISGPQSKIIKIENPEDLRVVIDLSNAKAGKYQEKYQVKGLADDIHYSVKPK-LANITLENKVTKKMTVQPDVSQSDIDPLYKITKQEVSPQTVKVTGGEEQLNDIAYLKATF-KTNKKINGDTKDVAEVTAFDKKLNKLNVSIQPNEVNLQVKVEPFSKKVKVNVKQKGSLADDKELSSIDLEDKEIEIFGSRDDLQNISEVDAEVDLDGISESTEKTVKINLPEHVTKAQPSETKAYINVK |
| 1LXM Chain:A ((56-215)) | --------------------------------TVKISDKSGKIIKEVPLSVTASTED-NFTKLLDKWNDVTIGNYVYDTNDSNMQKLNQKLDETNAK--------NIEAIKLDSNRTFLWKDLDNLNNSAQLTATYRRLEDLAKQITNPHSTIYKNEKAIRTVK--------ESLAWLHQNFYNVNKDIEG------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LXM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 34475 for 789 contacts (43.7/contact) +
2D Compatibility (PS) -14145 + (NN) 950 + (LL) 11904
1D Compatibility (HY) -2400 + (ID) 1950
Total energy: 28834.0 ( 36.54 by residue)
QMean score : 0.051
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