Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSLILAEKPSVARDIADALQINQKRNGYFENNQYIVTWALGHLVTNATPEQYDKNLKEWRLEDLPIIPKYMKTVVIGKTSKQFKTVKALILDNKVKDIIIATDAGREGELVARLILDKVGNKKPIRRLWISSVTKKAIQQGFKNLK--DGRQYNDLYYAALARSEADWIVGINATRALTTKYDAQLSLGRVQTPTIQLVNTRQQEINQFKPQQYFTLSLTVKGFDFQLE-SNQRYTNKETLEQMVNNLKNVDGKIKSVATKHKKSYPQSLYNLTDLQQDMYRRYKIGPKETLNTLQSLYE-------RHKVVTYPRTDSNYLTTDMVDTMKERIQATMATTYKDQARPLMSKTF------SSKMSIFNNQKVSD-HHAIIPTEVRPVMSD----LSNRELKLYDMIVERFLEALMPPHEYDAITVTLEVAGHTFVLKENVTTVL--GFKSIRQGESITEMQQPFSEGDEVKISKTNIREHETTPPEYFNEGSLLKAMENPQNFIQLKDKKYAQTLKQTGGIGTVATRADIIDKLFNMNAIESRDGKIKVTSKGKQI---LELAPEELTSPLLTAQWEEKLLLIERGKYQAKTFINEMKDFTKDVVNGIKNSDRKYKHDNLTTTECPTCGKFMIKVKTKNGQMLVCQDPSCKTKKNVQRKTNARCPNCKKKLTLFGKGKEAVYRCVCGHSETQAHMDQRMKSKSSGKVSRKEMKKYMNKNEGLDNNPFKDALKNLNL |
| 2GAJ Chain:A ((7-588)) | --KYIVVESPAKAKTIKSIL-----------GNEYEVFASMGHII-DLPKSKFGVDLEK----DFE--PEF--AVIKGKE----KVVEKLKDLAKKGELLIASDMDREGEAIAWHIARVTNTLGRKNRIVFSEITPRVIREAVKNPREIDMKKVR----AQLARRILDRIVGYSLSPVLWRNFKSNLSAGRVQSATLKLVCDREREILRFVPKKYHRITVNFDGLTAEIDVKEKKFFDAETLKE-IQSIDELVVEEKKVSV--KKFAPPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYEGVETKDGHIAFITYMRTDS----TRVSDYAKE------------EARNLITEVFGEEYVG--------------AHEAIRPTNVFMTPEEAGKYLNSDQKKLYELIWKRFLASQMKPSQYEETRFVLRTKDGKYRFKGTVLKKIFDGYEKVWKTERNT-GEFPFEEGESVKPVVVKIEEQETKPKPRYTEGSLVKEMERL-------------------GIGRPSTYASTIKLLLNRGYIKKIRGYLYPTIVGSVVMDYLEKKYSDVVSVSFTAEMEKDLDEVEQGKKTDKIVLRE---FYESFSSVFDRNDR-IVVDFPTNQKC-SCGKEMRLSFGKYGFYLKCECGKTRSVKN--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142595 for 4292 contacts (-33.2/contact) +
2D Compatibility (PS) -57724 + (NN) -8350 + (LL) 10960
1D Compatibility (HY) -27200 + (ID) 8700
Total energy: -233609.0 ( -54.43 by residue)
QMean score : 0.444
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