Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVEQIKDKLGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEM--ARIAKVYAEL-GVKKIRITGGEP-LMRRDLDVLIAKLNQIDGIEDI----GLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDD---QIIPMLEYFKDKHIE-IRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEI--------DPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFYGCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVANRQRKKINMNYIGG |
| 4K36 Chain:A ((3-308)) | -----------PLSLLIKPASSGCNLKCTYCFYHSLSDN--V---KSYGIMRDEVLESMVKRVLNEANGHCSFAFQGGEPTLAGLEFFEKLMELQRKHNYKNLKIYNSLQTNGTLIDESWAKFLSENKFLVGLSMDGPKEI--HNLNRKDCCGLDTFSKVERAAELFKKYKVEFNILCVVTSNTARHVNKVYKYFKEKDFKFLQFINCLDPLYEEKGKYNYSLKPKDYTKFLKNLFDFWYEDFLNGNRVSIRYFDGLLE-------TILLGKSSSCGMNGTCTCQFV-VESDGSVYPCDFYVLDKWRL-----GNIQDMTMKELFET--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26511 for 2123 contacts (-12.5/contact) +
2D Compatibility (PS) -29301 + (NN) -8927 + (LL) 4668
1D Compatibility (HY) -20000 + (ID) 2950
Total energy: -83021.0 ( -39.11 by residue)
QMean score : 0.187
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