Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLLLPLIIMLLVLAACGNQGEKNNKAETKSYKMDDGKTVDIPKDPKRIAVVAPTYAGGLKKLGANIV-AVNQQVDQS--KVLKDKFKGVTKIGDG---DVEKVAKEKPDLII--VYSTDKDIKKYQKVAPTVVVDYNKHKYLEQQEMLGKIVGKEDKVKAWKKDWEETTAKDGKEIKKAIGQDATVSLFDEFDKKLYTYGDNWGRGGEVLYQAFGLKMQPEQQKLTAKAGWAE--VKQEEIEKYAGD--YIVSTSEGKPTPG------YESTNMWKNLKATKEGHIVKVDAGTYWYNDPYTLDFMRKDLKEKLIKAAK |
| 3TNY Chain:A ((17-271)) | ----------------------------EVVTVEHAMGKT-EVPANPKRVVILTNEGTEALLELGVKPVGAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSETLRGEWKDNFKFYAKALNKEKEGQKVVADYESRMKDLKGKLGDKVNQEISMVRFMPGDVRIY-HGDTFSG---VILKELGFKRPGDQN----KDDFAERNVSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNGKAYKVD---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35152 for 1765 contacts (-19.9/contact) +
2D Compatibility (PS) -25096 + (NN) -6050 + (LL) 4876
1D Compatibility (HY) -15600 + (ID) 3500
Total energy: -80522.0 ( -45.62 by residue)
QMean score : 0.406
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