Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLVIEHVTKRF--GKMTAVNDISLELESGKMLGFLGRNGAGKTTTFRMILGLSEPTEGHITY-------NGKKLDKTMYNRIGYLPEERGLHGKLTVEEELKYLATLKGMSKTEIQQQISYWLERFDITENRKKRIDSLSKGNQQKIQLLASMLHKPELLILDEPFSGLDPVNVELLKEAVKDLND-WGSTIVYSSHRMEHVEELCDDVCILDKGQLV-------------------VSGDINHVRASNGNKKVVIESETTLPDLTNIRGI--IHSENMKQGLQLTIENEDVAKDIYQVVAHQGYVKRFQVVEPSLQDIFIEKVGGKDA |
| 1OXT Chain:A ((4-302)) | --IIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEINELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPEDVKL-------SKDVIKDDSWILVGKGKVK---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OXT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92595 for 1971 contacts (-47.0/contact) +
2D Compatibility (PS) -28307 + (NN) -4944 + (LL) 2276
1D Compatibility (HY) -19200 + (ID) 4500
Total energy: -147270.0 ( -74.72 by residue)
QMean score : 0.480
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