Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRNRVMNSVVNKYLLHNRSIMFKNDQDVERFFYKREIENRKKHKQPST---LNV-KANLEKLSL---DDMQVFRFNFRH-----------QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPE----FHIDDTFQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDAVLSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDEDVTQNN |
| 3H1A Chain:A ((14-239)) | ----------------------------------------REKAVPPGTEVPLDVMRKGMEKVAFKAADDIQVEQVTVAGCAAEWVRAPGCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKP---QHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTN-DSFKTRAEADPMVAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEV---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85099 for 1590 contacts (-53.5/contact) +
2D Compatibility (PS) -21350 + (NN) -9733 + (LL) 8008
1D Compatibility (HY) -7600 + (ID) 3100
Total energy: -118874.0 ( -74.76 by residue)
QMean score : 0.494
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