Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLENKVAVVTGASTGIGQASAIALAQEGAYVLAVDI-AEAVSETV-DKIKSNGDNAKAYNVDISDEQQVVDFVSDIKEQFGRIDVLFNNAGV--DNAAGRIHEYPIDVYDKIMNVDMRGTILMTKMMLPLMMNQG-GSIVNTSSFSGQAEDLYRSGYNAAKGAVINFTKSIAIEYGRDGIRSNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGGVMAYTWPGEMLSDDSWKRTLE |
| 2CFC Chain:A ((2-248)) | -----SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPE------LRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDG---AYT---------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2CFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -95871 for 2098 contacts (-45.7/contact) +
2D Compatibility (PS) -25941 + (NN) -7805 + (LL) 1592
1D Compatibility (HY) -14400 + (ID) 4850
Total energy: -147275.0 ( -70.20 by residue)
QMean score : 0.464
|
|
|