Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEKFDLVKLLNILKKNIKLLLILPAICLVVSTALTFFVMPDKYTASTQILVNMKKSSSDLAFQNVQSSLQSVNTYTEIIKS---PR-ILDKVSREFDGQYSTAELNSFLKVTNQTNSQIITVSVTTGNKSESDKIVNRISKVFAHDMPKIMSVDNVTILSSAHDNAVKVSPIVSVNLVISIIVGIVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQKF |
5CZZ Chain:A ((455-539)) | ------------------------------------------------------------------RSFIQSIKVINAIIKKYGLPNDIIIELAREKNSKDAQKMINEMQKRNRQTNERIEEIIRTTGK--ENAKYL--IEKIKLHDM---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CZZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6909 for 333 contacts (20.7/contact) +
2D Compatibility (PS) -7476 + (NN) 1222 + (LL) 13196
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: 8551.0 ( 25.68 by residue)
QMean score : 0.305
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