Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MKKKFVSSCIA-----STILFGTLLGVTYKAEAATVHVAGGVWSHGIGKHYVWSYYSHNKRNHGSTAVGKYSS------FSGVARPGVQSKAS--APKAWGGNKTFYSLH
3HH1 Chain:A ((3-115))
AHKGTLYVVATPLGNLDDMTFRAVNTLRNAGAIACEDTRRTSILLKHFGIEGKRLVSYHSFNEERAVRQVIELLEEGSDVALVTDAGTPAISDPGYTMASAAHAAGLPVVPVP
General information:
TITO was launched using:
RESULT:
Template:
3HH1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18786 for 644 contacts (-29.2/contact) +
2D Compatibility (PS) -10028 + (NN) -613 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -31327.0 ( -48.64 by residue)
QMean score : -0.028
(partial model without unconserved sides chains):
PDB file :
Tito_3HH1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HH1-query.scw
PDB file :
Tito_Scwrl_3HH1.pdb
: