Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADSLAGIDQVTSLHKNNELQLLCFRLGKNKDLYAVNVFKIREVVKYHGNLTIISHENNSLVEGLIIIRELTIPLIDMKKWFYYDSQNKSKDLRPYRIEKEKGEDDIVMICEFSRWTIGVRIYEADRILSKKWTEMEQSAGLGGSAGNNKLVSRTRYFDGRLVQVVDIEKMLIDVFPWIEDEKHNDLETLSKIHSNQCVLLADDSPSVLKTMQMILDKLGVKHIDFINGKTLLEHLFNPTTDVSNIGLIITDLEMPEASGFEVIKQVKNNPLTSKIPIVVNSSMSGSSNEDMARSLKADDFISK--SNPKDIQRVVKQFLELA |
1NXW Chain:A ((4-116)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDI-----IILDLMLPEIDGLEVAKTIRK---TSSVPILMLSAKDSEFDKVIGLELGADDYVTKPFSN-RELQARVKALLRRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NXW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71301 for 881 contacts (-80.9/contact) +
2D Compatibility (PS) -11850 + (NN) -6534 + (LL) 14396
1D Compatibility (HY) -9200 + (ID) 1800
Total energy: -86289.0 ( -97.94 by residue)
QMean score : 0.671
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