Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFLFKQKFCESLPKSFSKTLLALSLGLILLGVFIPFPKVPKHQSVPLALHFTEHYARFIPTILSVAIPLIQRDAVGLFQVANASIATTFLTHATKRALNHVTINDQRLGERPYGGNFNMPSGHSSMVGLAVAFLMRRYSVKKYLWLLPLIPLTMLARIYLDMHTIGAVLAGLGTGMLCVGLFTSPKNLN |
| 2IFO Chain:A ((21-44)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------PIAAIGGAVLTVMVGIKVYKWVRRA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4227 for 89 contacts (-47.5/contact) +
2D Compatibility (PS) -2342 + (NN) -1112 + (LL) 13304
1D Compatibility (HY) 400 + (ID) 100
Total energy: 5923.0 ( 66.55 by residue)
QMean score : -0.261
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