Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVTLINNENNARYEFETIECTRGPKAVDFSKLFETTGFFSYDPGYSSTAGCQSKISYINGKKGELYYRGHRIEDLVAKYKYVDVCRLLLTGELPKNQDESLEFELELRHRSFVHESLLNMFSAFPSNAHPMAKLSSGVSILSTLYSTHQNMHTEEDYQTMARRIVAKIPTLAAICYRNEVGAPIIYPDIARSYVENILFMLRGYPYSRLKHTTQGEVGITPLEVEAFDKILTLHADHGQNASSTTVRNVASTGVHPYAAISAGISALWGHLHGGANEKVLLQLEEIGDVKNVDKYIARVKDKNDNFKLMGFGHRVYKSYDPRAKILKGLKDELHQKGVKMDERLSEIAAKVEEIALKDEYFIERNLYPNVDFYSGTILRALKIPVRFFTPVFVIGRTVGWCAQLLEHVKSPQARITRPRQVYVGD
3MSU Chain:A ((13-421))--ATLKYADKNIEIELPVYSPSLGNDCIDVSSLVKH-GIFTYDPGFMSTAACESKITYIDGGKGVLLHRGYPIEEWTQKSNYRTLCYALIYGELPTDE-QVKSFRQEIINKMPVCEHVKAAIAAMPQHTHPMSSLIAGVNVLA---AEHIHNGQKESQDEVAKNIVAKIATIAAMAYRHNHGKKFLEPKMEYGYAENFLYMM----FADDESYKPDE-----LHIKAMDTIFMLHADHEQNASTSTVRLSGSTGNSPYAAIIAGITALWGPAHGGANEAVLKMLSEIGSTENIDKYIAKAKDK-----LMGFGHRVYKNTDPRATAMKKNCEEILAKLGHSDNPLLTVAKKLEEIAL------ERKLFSNVDFYSGIILKAMGIPEDMFTAIFALARTSGWISQWIEMVNDPAQKIGRPRQLYTGA


General information:
TITO was launched using:
RESULT:

Template: 3MSU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -205524 for 3221 contacts (-63.8/contact) +
2D Compatibility (PS) -42000 + (NN) -12227 + (LL) 972
1D Compatibility (HY) -28800 + (ID) 9200
Total energy: -296779.0 ( -92.14 by residue)
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_3MSU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MSU-query.scw
PDB file : Tito_Scwrl_3MSU.pdb: