Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEIILITGAYGMVGQNTALYFKKNK----PDVTLLTPKKSELYLLDKDNVQAYLKEYKPTGIIHCAGRVGGIVANMNDLSTYMVENLLMGLYLFSSALDLGVKKAINLASSCAYPKYAPNPLKESDLLNGSLEPTNEGYALAKLSVMKYCEYVSAEKGVFYKTLVPCNLYGEFDKFEEKIAHMIPGLIARMHTAKLKNEKNFAMWGDGTARREYLNAKDLAR-FIALAYENIAQMPSVMNVGSGVDYSIEEYYEKVAQVLDYKGVFVKDSSKPVGMQQKLMDISKQKALKWELEI-PLEQGIKEAYEYYLKLLEV |
| 4B8W Chain:A ((9-311)) | ----ILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADL--TDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSA-LTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRFTPFKQAVKETCAWFTDNYEQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B8W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141059 for 2553 contacts (-55.3/contact) +
2D Compatibility (PS) -31871 + (NN) -11839 + (LL) 624
1D Compatibility (HY) -15600 + (ID) 4200
Total energy: -203945.0 ( -79.88 by residue)
QMean score : 0.529
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